PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100065340111
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 284aa    MW: 31270 Da    PI: 9.4449
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100065340111genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-093864430
                                  HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                           HLH  4 ahnerErrRRdriNsafeeLrellPka 30
                                   hn  E+rRR+riN+++  L+ l+P++
  Ote100065340111|100065340111 38 VHNLSEKRRRSRINEKMKALQNLIPNS 64
                                  6************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.67E-93166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-103187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.4073486IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.90E-63768No hitNo description
PfamPF000105.8E-73864IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MKRMNVAMRE AVEALVSETA AKSAPPRCSS KRSRAAEVHN LSEKRRRSRI NEKMKALQNL  60
IPNSNKVRML IDGQSLDARR SYRVPQAAPA PSAGKSVAAC FSSHFLYLSL AKLIGSCMLT  120
MRKGLSLYPL CLPGMLHQPN QVSQTRLDVY GTDKYLNVDA TKEMGMILNV SADSVLRIPE  180
NCVKQEHVSD FSSINDKTSA DVESSLLPHQ FGAFQLCKSS KKEKLLPCLP LVEDRQQGAK  240
VTSSIPDEAQ TSRLKDDILE SCVAGAADIL LTNYVNNQAL SHHN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099122.14e-64PREDICTED: transcription factor SPATULA-like
TrEMBLA0A0H3YC583e-88A0A0H3YC58_SALMI; Basic helix-loop-helix transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA98502227